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tolA protein (Idiomarina loihiensis) - STRING interaction network
"tolA" - TolA-like protein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tolATolA-like protein (267 aa)    
Predicted Functional Partners:
tolB
Translocation protein TolB; Involved in the TonB-independent uptake of proteins (449 aa)
 
 
  0.977
IL1078
Hypothetical protein (253 aa)
 
      0.936
exbD
Biopolymer transport protein (142 aa)
 
 
  0.900
IL1083
TonB system biopolymer transport component (236 aa)
   
 
  0.864
pal
Peptidoglycan-associated lipoprotein (178 aa)
   
        0.775
IL1084
Thioesterase (136 aa)
   
   
  0.736
IL1858
TonB system biopolymer transport component (455 aa)
 
 
  0.728
IL1857
TonB system biopolymer transport component (174 aa)
 
 
  0.726
IL2116
Biopolymer transport protein (135 aa)
   
 
  0.721
IL1856
Biopolymer transport protein (133 aa)
   
 
  0.721
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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