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IL1093 protein (Idiomarina loihiensis) - STRING interaction network
"IL1093" - LysR family transcriptional regulator in Idiomarina loihiensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1093LysR family transcriptional regulator (297 aa)    
Predicted Functional Partners:
cmoB
SAM-dependent methyltransferase; Catalyzes carboxymethyl transfer from carboxy-S- adenosyl-L-methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5-carboxymethoxyuridine (cmo5U) at position 34 in tRNAs (323 aa)
              0.791
cmoA
SAM-dependent methyltransferase; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM) (243 aa)
              0.784
IL1090
Signal protein (476 aa)
              0.576
IL2331
Pirin (304 aa)
 
          0.517
IL0830
Pirin (278 aa)
 
          0.470
IL1254
LysR family transcriptional regulator (281 aa)
   
          0.462
IL1176
3’-5’ exonuclease (215 aa)
   
          0.443
aspS
Aspartyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Asp) in a two-step reaction- aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) (589 aa)
              0.439
IL1793
Type II phosphatidic acid phosphatase (169 aa)
   
          0.438
IL1088
Hypothetical protein (249 aa)
              0.418
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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