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IL1208 protein (Idiomarina loihiensis) - STRING interaction network
"IL1208" - Response regulator in Idiomarina loihiensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Experiments
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Textmining
[Homology]
Score
IL1208Response regulator (520 aa)    
Predicted Functional Partners:
IL2120
Signal transduction histidine kinase (577 aa)
 
 
  0.823
IL0604
Signal transduction histidine kinase (455 aa)
 
 
  0.821
IL0492
Signal transduction histidine kinase (539 aa)
 
 
  0.819
IL1207
Metal-dependent amidohydrolase with the TIM-barrel fold (550 aa)
   
        0.817
pdxH
Pyridoxamine phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5’- phosphate (PNP) or pyridoxamine 5’-phosphate (PMP) into pyridoxal 5’-phosphate (PLP) (212 aa)
              0.805
IL1205
Hypothetical protein (175 aa)
 
          0.583
barA
Hybrid sensor histidine kinase (866 aa)
 
  0.570
IL1447
Hybrid sensor histidine kinase (644 aa)
 
  0.564
hisH
Glutamine amidotransferase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR (196 aa)
     
      0.557
secY
Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently (442 aa)
       
      0.553
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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