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IL1217 protein (Idiomarina loihiensis) - STRING interaction network
"IL1217" - Plastocyanin domain-containing protein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1217Plastocyanin domain-containing protein (117 aa)    
Predicted Functional Partners:
IL1218
Cation transport ATPase (753 aa)
 
          0.936
IL1219
Hypothetical protein (152 aa)
 
          0.675
IL1163
Hypothetical protein (774 aa)
   
          0.590
IL1224
Outer membrane efflux protein (423 aa)
 
          0.573
IL1220
Hypothetical protein (123 aa)
              0.506
IL1216
Hypothetical protein (147 aa)
              0.497
IL1231
Hypothetical protein (144 aa)
   
          0.415
IL1221
Nitrogen regulatory protein PII (112 aa)
              0.405
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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