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IL1224 protein (Idiomarina loihiensis) - STRING interaction network
"IL1224" - Outer membrane efflux protein in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1224Outer membrane efflux protein (423 aa)    
Predicted Functional Partners:
IL1223
Membrane-fusion protein, RND-like efflux system component (509 aa)
 
     
  0.979
IL1222
Co/Zn/Cd efflux system membrane protein (1041 aa)
 
     
  0.978
IL1219
Hypothetical protein (152 aa)
 
          0.830
IL0463
Co/Zn/Cd efflux system membrane fusion protein (413 aa)
 
     
  0.815
IL0464
Co/Zn/Cd efflux system membrane protein (1033 aa)
 
     
  0.797
IL1237
Secreted metal-binding protein (163 aa)
 
          0.701
IL2114
Hypothetical protein (417 aa)
   
          0.606
IL1217
Plastocyanin domain-containing protein (117 aa)
 
          0.573
IL1225
Hypothetical protein (109 aa)
              0.504
IL1221
Nitrogen regulatory protein PII (112 aa)
              0.466
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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