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IL1227 protein (Idiomarina loihiensis) - STRING interaction network
"IL1227" - Hypothetical protein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1227Hypothetical protein (243 aa)    
Predicted Functional Partners:
IL1226
Na+-transporting NADH-ubiquinone oxidoreductase subunit NqrF (548 aa)
 
          0.947
IL1228
Hypothetical protein (901 aa)
 
          0.889
IL0657
Zn-ribbon domain-containing protein (302 aa)
   
          0.661
IL0909
Hypothetical protein (407 aa)
   
          0.641
IL1223
Membrane-fusion protein, RND-like efflux system component (509 aa)
 
          0.637
IL2428
Secreted protein related to cyanophycinase CphE (558 aa)
   
          0.634
IL1422
Hypothetical protein (204 aa)
   
          0.609
IL1521
Hypothetical protein (365 aa)
   
          0.603
IL0060
LuxR family transcriptional regulator (169 aa)
   
          0.565
IL0463
Co/Zn/Cd efflux system membrane fusion protein (413 aa)
 
          0.560
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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