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IL1230 protein (Idiomarina loihiensis) - STRING interaction network
"IL1230" - Amino acid transporter in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1230Amino acid transporter (436 aa)    
Predicted Functional Partners:
metL
Aspartokinase II (813 aa)
   
 
  0.873
copB
Hypothetical protein (247 aa)
 
          0.802
sufI
Multicopper oxidase (587 aa)
 
 
      0.799
IL1231
Hypothetical protein (144 aa)
              0.790
IL1237
Secreted metal-binding protein (163 aa)
 
          0.741
copC
Hypothetical protein (116 aa)
              0.741
copD
Copper export protein (281 aa)
              0.741
trpD
Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5’-phosphoribosyl)-anthranilate (PRA) (337 aa)
       
      0.673
IL1236
Sec-independent protein secretion pathway protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system (72 aa)
              0.645
IL0319
Membrane protein related to Kef-type K+ transport system NAD-binding component (140 aa)
 
          0.576
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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