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IL1246 protein (Idiomarina loihiensis) - STRING interaction network
"IL1246" - Outer membrane lipoprotein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1246Outer membrane lipoprotein (61 aa)    
Predicted Functional Partners:
IL1247
Hypothetical protein (792 aa)
 
          0.970
IL1245
Hypothetical protein (117 aa)
 
        0.966
IL1244
Hypothetical protein (265 aa)
              0.594
IL1779
3-methyladenine DNA glycosylase (227 aa)
   
          0.432
IL0280
Hypothetical protein (259 aa)
   
          0.403
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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