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IL1253 protein (Idiomarina loihiensis) - STRING interaction network
"IL1253" - Hypothetical protein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1253Hypothetical protein; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety (172 aa)    
Predicted Functional Partners:
IL1545
Thioredoxin-like domain-containing protein (180 aa)
   
          0.766
IL1163
Hypothetical protein (774 aa)
   
          0.751
IL1252
Hypothetical protein (96 aa)
 
          0.691
IL2320
HD superfamily hydrolase (390 aa)
   
          0.666
IL1251
Cytochrome b561 family protein (176 aa)
 
          0.642
IL1285
Hypothetical protein (581 aa)
   
          0.607
IL1250
Acetyltransferase (202 aa)
              0.580
alkB
Alkylated DNA repair protein (217 aa)
              0.580
IL1254
LysR family transcriptional regulator (281 aa)
              0.579
IL2158
Hypothetical protein (582 aa)
   
          0.477
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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