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IL1254 protein (Idiomarina loihiensis) - STRING interaction network
"IL1254" - LysR family transcriptional regulator in Idiomarina loihiensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1254LysR family transcriptional regulator (281 aa)    
Predicted Functional Partners:
IL2491
LysR family transcriptional regulator (285 aa)
   
          0.773
IL0627
LysR family transcriptional regulator (290 aa)
   
          0.770
IL0465
LysR family transcriptional regulator (292 aa)
   
          0.759
IL2095
LysR family transcriptional regulator (280 aa)
   
          0.738
nhaR
LysR family transcriptional regulator (288 aa)
   
          0.665
IL1255
Amino acid transporter LysE (214 aa)
              0.626
IL1253
Hypothetical protein; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety (172 aa)
              0.579
oxyR
LysR family transcriptional regulator (304 aa)
   
          0.522
IL1252
Hypothetical protein (96 aa)
 
          0.507
IL1257
M23/M37 family peptidase (273 aa)
              0.495
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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