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IL1258 protein (Idiomarina loihiensis) - STRING interaction network
"IL1258" - Aminopeptidase in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1258Aminopeptidase (589 aa)    
Predicted Functional Partners:
IL1259
Glycosyltransferase (229 aa)
              0.651
IL1260
Signal transduction ATPase (364 aa)
              0.650
IL1261
Response regulator (272 aa)
              0.649
IL1262
Hypothetical protein (281 aa)
              0.646
IL1277
Aminopeptidase (863 aa)
 
     
  0.590
IL1269
Zn-ribbon protein (109 aa)
   
          0.539
cafA
RNase G (489 aa)
           
  0.517
dsbC
Protein-disulfide isomerase (243 aa)
 
          0.460
birA
Biotin--protein ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5’-adenylate (BirA-bio- 5’-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon (331 aa)
              0.454
maoC
Acyl dehydratase (296 aa)
   
          0.405
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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