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IL1271 protein (Idiomarina loihiensis) - STRING interaction network
"IL1271" - Signal protein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1271Signal protein (157 aa)    
Predicted Functional Partners:
proQ
solute/DNA competence effector; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities (208 aa)
   
        0.896
prc
Carboxy-terminal protease (685 aa)
              0.879
IL1272
Hypothetical protein (96 aa)
              0.859
IL1270
Hypothetical protein (99 aa)
              0.859
IL1269
Zn-ribbon protein (109 aa)
              0.859
IL1525
Bifunctional methionine sulfoxide reductase A/B (370 aa)
     
 
  0.694
IL1275
SNF family Na(+)-dependent transporter (461 aa)
              0.572
IL1276
Na+/H+ antiporter (484 aa)
              0.559
IL1268
Na(+)-linked D-alanine and glycine permease (558 aa)
              0.553
IL1267
Carboxypeptidase, Zn dependent (375 aa)
 
          0.530
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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