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IL1295 protein (Idiomarina loihiensis) - STRING interaction network
"IL1295" - RND family efflux transporter in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1295RND family efflux transporter (1041 aa)    
Predicted Functional Partners:
IL1294
Hypothetical protein (359 aa)
 
   
  0.977
acrA
Acriflavin resistance protein A (384 aa)
   
  0.827
tolC
Outer membrane protein (461 aa)
 
  0.819
yajC
Preprotein translocase subunit YajC (111 aa)
   
 
      0.783
IL2305
HlyD family secretion protein (351 aa)
 
   
  0.782
IL0601
RND family efflux system membrane fusion protein (347 aa)
 
   
  0.678
IL1634
Outer membrane efflux protein (415 aa)
   
  0.655
czcC
Co/Zn/Cd efflux system protein (415 aa)
   
  0.655
IL1293
Zn-ribbon protein (63 aa)
              0.636
IL1296
Methyl-accepting chemotaxis protein (546 aa)
     
      0.636
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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