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lapB protein (Idiomarina loihiensis) - STRING interaction network
"lapB" - Tetratricopeptide repeat protein in Idiomarina loihiensis
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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lapBTetratricopeptide repeat protein; Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane (385 aa)    
Predicted Functional Partners:
pyrF
Orotidine-5’-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5’- monophosphate (OMP) to uridine 5’-monophosphate (UMP) (231 aa)
              0.887
IL1353
Hypothetical protein (86 aa)
              0.859
himD
Nucleoid DNA-binding protein, IHF beta subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control (93 aa)
              0.767
comEA
DNA uptake protein (106 aa)
              0.726
rpsA
Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence (560 aa)
              0.703
mraY
UDP-N-acetylmuramyl pentapeptide phosphotransferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan (360 aa)
       
    0.690
dniR
Soluble lytic murein transglycosylase (544 aa)
 
 
    0.648
IL0838
Membrane-associated Zn-dependent protease (451 aa)
           
  0.643
mutH
DNA mismatch repair protein; Sequence-specific endonuclease that cleaves unmethylated GATC sequences. It is involved in DNA mismatch repair (224 aa)
   
          0.638
mltB
Membrane-bound lytic murein transglycosylase B (323 aa)
   
   
    0.633
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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