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IL1372 protein (Idiomarina loihiensis) - STRING interaction network
"IL1372" - RND superfamily exporter in Idiomarina loihiensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1372RND superfamily exporter (776 aa)    
Predicted Functional Partners:
IL1373
BNR/Asp-box repeat-containing protein (390 aa)
 
        0.979
IL1374
Hypothetical protein (449 aa)
 
        0.942
IL0516
Hypothetical protein (626 aa)
 
   
  0.874
mnmC
Fused DadA-like amino acid oxidase domain/uncharacterized domain-containing protein; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34 (606 aa)
     
        0.664
IL2174
Hypothetical protein (162 aa)
   
          0.529
IL0172
Hypothetical protein (266 aa)
 
          0.518
IL0277
DNA-binding transcriptional repressor FabR (206 aa)
 
          0.495
vacJ
Surface lipoprotein (248 aa)
 
        0.477
IL1664
Hypothetical protein (249 aa)
   
          0.477
IL1682
Hypothetical protein (236 aa)
   
          0.473
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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