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IL1373 protein (Idiomarina loihiensis) - STRING interaction network
"IL1373" - BNR/Asp-box repeat-containing protein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1373BNR/Asp-box repeat-containing protein (390 aa)    
Predicted Functional Partners:
IL1372
RND superfamily exporter (776 aa)
 
        0.979
IL1374
Hypothetical protein (449 aa)
 
          0.940
IL0516
Hypothetical protein (626 aa)
 
          0.860
IL0173
RND superfamily exporter (838 aa)
 
        0.519
IL1682
Hypothetical protein (236 aa)
   
          0.507
rpmE
Ribosomal protein L31; Binds the 23S rRNA (72 aa)
     
        0.479
IL2174
Hypothetical protein (162 aa)
   
          0.468
IL1469
Hypothetical protein (371 aa)
   
     
  0.465
IL1664
Hypothetical protein (249 aa)
   
          0.417
IL1449
Alpha/beta hydrolase (355 aa)
   
          0.409
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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