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smtA protein (Idiomarina loihiensis) - STRING interaction network
"smtA" - SAM-dependent methyltransferase in Idiomarina loihiensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
smtASAM-dependent methyltransferase (262 aa)    
Predicted Functional Partners:
IL1375
2-hydroxy-3-oxopropionate reductase (289 aa)
              0.859
IL1377
NIF3 family protein (253 aa)
     
      0.831
bioD
Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring (222 aa)
   
 
  0.717
aidB
Acyl-CoA dehydrogenase (559 aa)
 
 
    0.685
ubiH
2-polyprenyl-6-methoxyphenol hydroxylase (388 aa)
   
    0.683
IL1339
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis (79 aa)
   
  0.623
IL0128
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis (83 aa)
   
  0.623
IL0127
Acyl carrier protein (90 aa)
   
  0.623
IL1963
acyl-CoA dehydrogenase (594 aa)
     
    0.605
IL1665
acyl-CoA dehydrogenase (817 aa)
     
    0.605
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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