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IL1377 protein (Idiomarina loihiensis) - STRING interaction network
"IL1377" - NIF3 family protein in Idiomarina loihiensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1377NIF3 family protein (253 aa)    
Predicted Functional Partners:
smtA
SAM-dependent methyltransferase (262 aa)
     
      0.831
IL1375
2-hydroxy-3-oxopropionate reductase (289 aa)
   
        0.813
IL1479
Allophanate hydrolase subunit 2 (317 aa)
   
 
  0.647
IL1378
Hypothetical protein (139 aa)
              0.624
IL1480
Allophanate hydrolase subunit 1 (237 aa)
   
   
  0.617
udk
Uridine kinase (210 aa)
   
      0.529
mnmC
Fused DadA-like amino acid oxidase domain/uncharacterized domain-containing protein; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34 (606 aa)
 
          0.513
IL2519
Deoxyguanosinetriphosphate triphosphohydrolase-like protein (426 aa)
 
        0.504
IL0741
Deoxyguanosinetriphosphate triphosphohydrolase-like protein (440 aa)
 
        0.499
rpoD
DNA-directed RNA polymerase sigma 70 subunit; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (609 aa)
     
 
  0.490
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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