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IL1391 protein (Idiomarina loihiensis) - STRING interaction network
"IL1391" - RNA polymerase sigma factor in Idiomarina loihiensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1391RNA polymerase sigma factor (206 aa)    
Predicted Functional Partners:
chrR
Transcription negative regulator ChrR (225 aa)
 
 
 
  0.992
rseA
Negative regulator of sigma E activity; An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic prote [...] (195 aa)
 
 
  0.910
IL1387
Ketosteroid isomerase-like protein (144 aa)
 
          0.782
IL1384
Hypothetical protein (240 aa)
 
          0.756
IL1390
Hypothetical protein (192 aa)
 
          0.747
fecR
Iron-dicitrate sensor, membrane component (319 aa)
   
 
  0.730
IL1380
Hypothetical protein (175 aa)
 
          0.723
IL1385
NAD/FAD-binding protein (424 aa)
 
          0.712
rseB
Negative regulator of sigma E activity (321 aa)
   
 
  0.711
IL1388
Deoxyribodipyrimidine photolyase (468 aa)
 
          0.706
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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