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IL1400 protein (Idiomarina loihiensis) - STRING interaction network
"IL1400" - DMT superfamily permease in Idiomarina loihiensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1400DMT superfamily permease (297 aa)    
Predicted Functional Partners:
IL1401
Zn-ribbon protein (69 aa)
 
          0.777
IL2541
Multidrug ABC transporter ATPase and permease (610 aa)
     
      0.635
msbA
Multidrug ABC transporter ATPase and permease; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation (582 aa)
     
      0.635
IL0540
Multidrug ABC transporter ATPase and permease (598 aa)
     
      0.635
IL2568
SulA-like SOS-response cell division inhibitor (199 aa)
   
          0.614
IL1524
Hypothetical protein (349 aa)
   
          0.607
thrS
Threonyl-tRNA synthetase (638 aa)
   
        0.605
infC
Translation initiation factor 3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins (181 aa)
              0.555
pheT
Phenylalanyl-tRNA synthetase beta subunit (795 aa)
   
      0.542
oadG
Oxaloacetate decarboxylase subunit gamma; Lyase and sodium transporter (87 aa)
   
          0.531
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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