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IL1401 protein (Idiomarina loihiensis) - STRING interaction network
"IL1401" - Zn-ribbon protein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1401Zn-ribbon protein (69 aa)    
Predicted Functional Partners:
IL1400
DMT superfamily permease (297 aa)
 
          0.777
seqA
Replication initiation regulator SeqA; Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated (160 aa)
   
          0.738
IL2315
Hypothetical protein (116 aa)
   
          0.725
IL2454
Arginase (349 aa)
   
          0.716
IL2225
Hypothetical protein (261 aa)
   
          0.682
IL1265
Hypothetical protein (251 aa)
   
          0.660
IL1875
Hypothetical protein (834 aa)
   
          0.637
IL2132
Hypothetical protein (110 aa)
   
          0.630
IL2113
Porin (323 aa)
   
          0.625
IL0380
Hypothetical protein (619 aa)
   
          0.610
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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