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gabD protein (Idiomarina loihiensis) - STRING interaction network
"gabD" - Succinate-semialdehyde dehydrogenase in Idiomarina loihiensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gabDSuccinate-semialdehyde dehydrogenase (482 aa)    
Predicted Functional Partners:
sdhA
Succinate dehydrogenase flavoprotein subunit (588 aa)
   
  0.981
IL1410
Alcohol dehydrogenase (348 aa)
 
 
  0.978
sdhC
Succinate dehydrogenase/fumarate reductase cytochrome b subunit (124 aa)
     
  0.977
sdhB
Succinate dehydrogenase iron-sulfur subunit (237 aa)
   
 
  0.977
ilvB
Acetolactate synthase (552 aa)
   
 
  0.973
IL1210
malate/L-lactate dehydrogenase (356 aa)
       
  0.967
betA
Choline dehydrogenase-like flavoprotein (508 aa)
 
 
  0.951
acoA
Oxoisovalerate dehydrogenase subunits alpha/beta (728 aa)
   
  0.889
fadJ
Multifunctional fatty acid oxidation complex subunit alpha; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities (708 aa)
   
  0.880
fadB
Fatty acid oxidation complex alpha subunit; Involved in the aerobic and anaerobic degradation of long-chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate (718 aa)
 
  0.880
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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