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IL1417 protein (Idiomarina loihiensis) - STRING interaction network
"IL1417" - Porin in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1417Porin (202 aa)    
Predicted Functional Partners:
IL1415
Hypothetical protein (910 aa)
 
          0.704
IL1416
Carboxypeptidase, Zn-dependent (389 aa)
 
          0.642
IL2158
Hypothetical protein (582 aa)
   
          0.599
IL2279
Hypothetical protein (168 aa)
   
          0.556
IL1163
Hypothetical protein (774 aa)
   
          0.529
IL1269
Zn-ribbon protein (109 aa)
   
          0.525
IL0687
Alpha/beta hydrolase (166 aa)
   
          0.521
IL0760
Hypothetical protein (264 aa)
   
          0.515
IL1418
Choline-glycine betaine transporter (564 aa)
              0.483
copD
Copper export protein (281 aa)
   
          0.471
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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