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IL1418 protein (Idiomarina loihiensis) - STRING interaction network
"IL1418" - Choline-glycine betaine transporter in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1418Choline-glycine betaine transporter (564 aa)    
Predicted Functional Partners:
betA
Choline dehydrogenase-like flavoprotein (508 aa)
   
   
  0.771
IL1419
Signal-transduction protein (617 aa)
 
          0.699
IL1420
DNA polymerase III subunit epsilon (248 aa)
              0.666
IL0894
Hypothetical protein (187 aa)
       
      0.587
IL1913
Hypothetical protein (470 aa)
 
          0.556
IL2424
Smr domain-containing protein (195 aa)
       
      0.499
IL1417
Porin (202 aa)
              0.483
htpX
Heat shock protein HtpX (287 aa)
     
      0.469
IL0984
Zn-dependent protease (278 aa)
     
      0.469
IL1421
Methyl-accepting chemotaxis protein (663 aa)
              0.457
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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