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IL1420 protein (Idiomarina loihiensis) - STRING interaction network
"IL1420" - DNA polymerase III subunit epsilon in Idiomarina loihiensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1420DNA polymerase III subunit epsilon (248 aa)    
Predicted Functional Partners:
dnaN
DNA polymerase sliding clamp subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (367 aa)
     
  0.986
IL1419
Signal-transduction protein (617 aa)
 
   
  0.981
IL1689
DNA polymerase III alpha subunit (1158 aa)
     
  0.973
dnaX
DNA polymerase III, gamma/tau subunits (681 aa)
     
  0.966
holB
DNA polymerase III subunit delta’ (286 aa)
     
  0.922
holC
DNA polymerase III chi subunit (149 aa)
     
    0.917
pykA
Pyruvate kinase II, glucose stimulated (476 aa)
     
 
  0.905
polA
DNA polymerase I (921 aa)
   
  0.904
holA
DNA polymerase III subunit delta (360 aa)
       
  0.903
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate (143 aa)
     
 
    0.901
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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