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IL1424 protein (Idiomarina loihiensis) - STRING interaction network
"IL1424" - Hypothetical protein in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1424Hypothetical protein (392 aa)    
Predicted Functional Partners:
IL1425
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis-aconitate (864 aa)
 
 
  0.997
prpD
2-methylcitrate dehydratase (494 aa)
   
 
  0.941
acnB
Aconitase B (862 aa)
       
  0.940
prpB
2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate (292 aa)
 
   
  0.875
IL1423
Hypothetical protein (84 aa)
              0.859
prpC
Citrate synthase (374 aa)
   
        0.746
IL1428
GntR family transcriptional regulator (229 aa)
 
          0.707
IL2199
Metal-dependent hydrolase (258 aa)
       
    0.645
acnA
Aconitase A; Catalyzes the isomerization of citrate to isocitrate via cis-aconitate (889 aa)
   
   
  0.459
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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