STRINGSTRING
IL1449 protein (Idiomarina loihiensis) - STRING interaction network
"IL1449" - Alpha/beta hydrolase in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1449Alpha/beta hydrolase (355 aa)    
Predicted Functional Partners:
IL1450
Hypothetical protein (107 aa)
 
          0.843
IL2326
Hypothetical protein (73 aa)
   
          0.606
xthA
Exonuclease III (269 aa)
              0.600
IL0853
GNAT family acetyltransferase (226 aa)
   
          0.582
IL0516
Hypothetical protein (626 aa)
   
          0.572
IL1682
Hypothetical protein (236 aa)
   
          0.550
IL1374
Hypothetical protein (449 aa)
   
          0.522
IL2145
Hypothetical protein (294 aa)
   
          0.486
IL0859
SmpA /OmlA family lipoprotein (128 aa)
   
          0.484
IL1372
RND superfamily exporter (776 aa)
   
          0.472
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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