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IL1521 protein (Idiomarina loihiensis) - STRING interaction network
"IL1521" - Hypothetical protein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1521Hypothetical protein (365 aa)    
Predicted Functional Partners:
mfd
Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site (1160 aa)
              0.832
IL1523
Extracellular nuclease (589 aa)
              0.805
IL1522
MarR family transcriptional regulator (159 aa)
              0.805
IL1285
Hypothetical protein (581 aa)
   
          0.767
IL0859
SmpA /OmlA family lipoprotein (128 aa)
   
          0.762
IL0678
Alkaline phosphatase (544 aa)
   
          0.760
pulN
Type II secretory pathway, component PulN (248 aa)
   
          0.758
IL1269
Zn-ribbon protein (109 aa)
   
          0.755
IL2428
Secreted protein related to cyanophycinase CphE (558 aa)
   
          0.747
IL2345
Hypothetical protein (167 aa)
   
          0.741
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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