STRINGSTRING
IL1522 protein (Idiomarina loihiensis) - STRING interaction network
"IL1522" - MarR family transcriptional regulator in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1522MarR family transcriptional regulator (159 aa)    
Predicted Functional Partners:
IL1523
Extracellular nuclease (589 aa)
   
        0.861
IL1521
Hypothetical protein (365 aa)
              0.805
mfd
Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site (1160 aa)
         
  0.768
IL1519
Hypothetical protein (209 aa)
              0.624
IL2153
Response regulator (216 aa)
     
 
  0.508
IL2006
Response regulator (210 aa)
     
 
  0.508
IL1206
Response regulator (207 aa)
     
 
  0.508
uvrY
Response regulator (216 aa)
     
 
  0.508
IL0314
Response regulator (198 aa)
     
 
  0.508
narL
Transcriptional regulator NarL (219 aa)
     
 
  0.508
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
Server load: low (10%) [HD]