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IL1523 protein (Idiomarina loihiensis) - STRING interaction network
"IL1523" - Extracellular nuclease in Idiomarina loihiensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1523Extracellular nuclease (589 aa)    
Predicted Functional Partners:
IL1522
MarR family transcriptional regulator (159 aa)
   
        0.861
IL1521
Hypothetical protein (365 aa)
              0.805
rnt
Ribonuclease T; Trims short 3’ overhangs of a variety of RNA species, leaving a one or two nucleotide 3’ overhang. Responsible for the end-turnover of tRNA- specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis (215 aa)
   
   
    0.773
mfd
Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site (1160 aa)
              0.764
guaB
IMP dehydrogenase (489 aa)
       
    0.753
IL0162
Secreted subtilisin-like peptidase (616 aa)
 
   
  0.663
IL1519
Hypothetical protein (209 aa)
              0.624
IL1176
3’-5’ exonuclease (215 aa)
   
   
    0.597
ushA
5’-nucleotidase (601 aa)
     
  0.586
IL1516
Lipoprotein release ABC transporter permease (411 aa)
 
          0.540
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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