STRINGSTRING
IL1543 protein (Idiomarina loihiensis) - STRING interaction network
"IL1543" - Hypothetical protein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1543Hypothetical protein (168 aa)    
Predicted Functional Partners:
IL1545
Thioredoxin-like domain-containing protein (180 aa)
 
          0.811
IL1109
Hypothetical protein (150 aa)
   
          0.659
IL1544
Signal protein (300 aa)
              0.628
IL2429
ABC transporter substrate-binding protein (428 aa)
   
          0.612
IL1111
Chemotaxis protein CheW (285 aa)
   
          0.548
IL1262
Hypothetical protein (281 aa)
   
          0.506
IL2225
Hypothetical protein (261 aa)
   
          0.498
IL1469
Hypothetical protein (371 aa)
   
          0.450
IL0116
Hypothetical protein (244 aa)
   
          0.447
flgM
Negative regulator of flagellin synthesis (107 aa)
   
          0.441
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
Server load: low (8%) [HD]