STRINGSTRING
IL1544 protein (Idiomarina loihiensis) - STRING interaction network
"IL1544" - Signal protein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1544Signal protein (300 aa)    
Predicted Functional Partners:
IL0500
Signal protein (244 aa)
 
          0.867
gltB
Glutamate synthase subunit alpha (1488 aa)
   
 
  0.856
IL1784
Disrupted signaling protein (443 aa)
 
 
 
  0.851
IL2267
Signal protein (737 aa)
 
  0.819
IL2456
Signal protein (690 aa)
 
          0.806
IL2168
Signaling protein (562 aa)
 
 
 
  0.804
IL1539
Signaling protein (529 aa)
 
          0.777
IL2545
Signaling protein (930 aa)
   
          0.776
glnK
Nitrogen regulatory protein PII (112 aa)
   
 
  0.771
glnB
Nitrogen regulatory protein PII (112 aa)
   
 
  0.771
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
Server load: low (9%) [HD]