STRINGSTRING
IL1545 protein (Idiomarina loihiensis) - STRING interaction network
"IL1545" - Thioredoxin-like domain-containing protein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1545Thioredoxin-like domain-containing protein (180 aa)    
Predicted Functional Partners:
IL1543
Hypothetical protein (168 aa)
 
          0.811
IL1253
Hypothetical protein; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety (172 aa)
   
          0.766
IL1544
Signal protein (300 aa)
              0.759
IL1163
Hypothetical protein (774 aa)
   
          0.754
IL2429
ABC transporter substrate-binding protein (428 aa)
   
          0.736
rsbU
Response regulator of sigma subunit, serine phosphatase (CheY-RsbU) (556 aa)
   
          0.696
rsbV
Anti-anti-sigma regulatory factor (101 aa)
   
          0.689
IL0116
Hypothetical protein (244 aa)
   
          0.688
IL2320
HD superfamily hydrolase (390 aa)
   
          0.648
IL0656
TesB-like acyl-CoA thioesterase (264 aa)
   
          0.627
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
Server load: low (7%) [HD]