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IL1548 protein (Idiomarina loihiensis) - STRING interaction network
"IL1548" - Hypothetical protein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1548Hypothetical protein (104 aa)    
Predicted Functional Partners:
IL1547
Deacylase/carboxypeptidase superfamily protein (303 aa)
 
          0.696
IL1549
Arabinose efflux permease (393 aa)
              0.618
smg
Hypothetical protein (157 aa)
   
          0.613
miaE
tRNA-(ms[2]io[6]A)-hydroxylase (199 aa)
   
          0.550
IL2447
Ribonuclease BN (284 aa)
   
          0.544
yihI
Hypothetical protein; A GTPase-activating protein (GAP) that modifies Der/EngA GTPase function. May play a role in ribosome biogenesis (137 aa)
   
          0.529
IL2317
Arginine N-succinyltransferase (340 aa)
   
          0.525
rsd
Regulator of sigma D (158 aa)
   
          0.518
recN
DNA repair ATPase RecN; May be involved in recombinational repair of damaged DNA (554 aa)
     
        0.461
astE
Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate (343 aa)
   
          0.447
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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