STRINGSTRING
fecR protein (Idiomarina loihiensis) - STRING interaction network
"fecR" - Iron-dicitrate sensor, membrane component in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fecRIron-dicitrate sensor, membrane component (319 aa)    
Predicted Functional Partners:
fecI
DNA-directed RNA polymerase specialized sigma subunit (196 aa)
 
 
  0.990
IL1592
TonB dependent receptor for iron chelates (974 aa)
 
        0.945
IL1595
Hypothetical protein (485 aa)
 
          0.895
IL1596
Hypothetical protein (893 aa)
 
        0.893
IL0054
DNA-directed RNA polymerase specialized sigma subunit (180 aa)
 
 
  0.810
fecA
Outer membrane receptor for Fe3+-dicitrate (709 aa)
   
 
  0.738
IL0795
Outer membrane receptor for ferric siderophore (723 aa)
 
   
  0.731
IL2423
DNA-directed RNA polymerase specialized sigma factor (357 aa)
   
 
  0.730
IL1936
DNA-directed RNA polymerase specialized sigma subunit (175 aa)
   
 
  0.730
IL1391
RNA polymerase sigma factor (206 aa)
   
 
  0.730
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
Server load: low (5%) [HD]