STRINGSTRING
IL1609 protein (Idiomarina loihiensis) - STRING interaction network
"IL1609" - LysR family transcriptional regulator in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1609LysR family transcriptional regulator (305 aa)    
Predicted Functional Partners:
IL0865
DNA-binding transcriptional activator GcvA (299 aa)
   
        0.740
IL2491
LysR family transcriptional regulator (285 aa)
   
          0.740
IL2190
LysR family transcriptional regulator (308 aa)
   
          0.733
IL1772
LysR family transcriptional regulator (303 aa)
   
          0.643
IL1291
LysR family transcriptional regulator (303 aa)
   
        0.629
IL1608
Short chain dehydrogenase/reductase (288 aa)
              0.616
IL1611
LysR family transcriptional regulator (283 aa)
   
          0.525
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
Server load: low (2%) [HD]