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IL1638 protein (Idiomarina loihiensis) - STRING interaction network
"IL1638" - Efflux family outer membrane protein in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1638Efflux family outer membrane protein (416 aa)    
Predicted Functional Partners:
IL1639
RND family transporter membrane-fusion protein (381 aa)
 
          0.973
IL1640
Metal efflux system membrane protein (1065 aa)
 
          0.942
IL0760
Hypothetical protein (264 aa)
   
          0.759
IL2429
ABC transporter substrate-binding protein (428 aa)
   
          0.758
IL2320
HD superfamily hydrolase (390 aa)
   
          0.748
IL2143
Hypothetical protein (215 aa)
   
          0.733
IL1634
Outer membrane efflux protein (415 aa)
   
          0.708
IL1285
Hypothetical protein (581 aa)
   
          0.702
copD
Copper export protein (281 aa)
   
          0.701
damX
Hypothetical protein (519 aa)
   
          0.693
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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