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IL1639 protein (Idiomarina loihiensis) - STRING interaction network
"IL1639" - RND family transporter membrane-fusion protein in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1639RND family transporter membrane-fusion protein (381 aa)    
Predicted Functional Partners:
IL1638
Efflux family outer membrane protein (416 aa)
 
          0.973
IL1640
Metal efflux system membrane protein (1065 aa)
 
          0.967
IL0063
Divalent cation exporter protein (1022 aa)
 
          0.724
IL1632
Metal efflux system membrane protein (1043 aa)
 
          0.720
IL1222
Co/Zn/Cd efflux system membrane protein (1041 aa)
 
          0.704
IL0464
Co/Zn/Cd efflux system membrane protein (1033 aa)
 
          0.702
czcA
Co/Zn/Cd efflux system membrane protein (1043 aa)
 
          0.700
IL1633
RND family transporter membrane-fusion protein (300 aa)
   
          0.695
czcB
Co/Zn/Cd efflux system protein (301 aa)
   
          0.651
IL1641
Co/Zn/Cd efflux system protein (295 aa)
              0.647
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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