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IL1640 protein (Idiomarina loihiensis) - STRING interaction network
"IL1640" - Metal efflux system membrane protein in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1640Metal efflux system membrane protein (1065 aa)    
Predicted Functional Partners:
IL0463
Co/Zn/Cd efflux system membrane fusion protein (413 aa)
 
  0.987
IL1223
Membrane-fusion protein, RND-like efflux system component (509 aa)
  0.981
IL1639
RND family transporter membrane-fusion protein (381 aa)
 
          0.967
IL1638
Efflux family outer membrane protein (416 aa)
 
          0.942
czcB
Co/Zn/Cd efflux system protein (301 aa)
 
   
  0.873
IL1633
RND family transporter membrane-fusion protein (300 aa)
 
   
  0.834
czcC
Co/Zn/Cd efflux system protein (415 aa)
 
 
  0.769
IL1634
Outer membrane efflux protein (415 aa)
 
 
  0.756
IL1641
Co/Zn/Cd efflux system protein (295 aa)
   
   
  0.748
IL1642
Hypothetical protein (111 aa)
         
  0.686
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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