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kdpD protein (Idiomarina loihiensis) - STRING interaction network
"kdpD" - K+ sensor histidine kinase in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kdpDK+ sensor histidine kinase (343 aa)    
Predicted Functional Partners:
kdpE
Response regulator (237 aa)
  0.999
trkG
K+ transport system, membrane component (393 aa)
   
   
  0.889
arcA
Response regulator (219 aa)
  0.849
phoB
Positive response regulator for pho regulon (CheY-wHTH) (228 aa)
  0.845
cpxR
Response regulator (226 aa)
  0.830
ompR
Osmolarity response regulator (241 aa)
  0.824
ffh
Signal recognition particle GTPase; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components (454 aa)
       
      0.810
ptsN
Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) (156 aa)
     
 
  0.806
IL0096
Signal transduction histidine kinase (407 aa)
   
     
  0.704
IL1375
2-hydroxy-3-oxopropionate reductase (289 aa)
         
  0.685
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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