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kdpE protein (Idiomarina loihiensis) - STRING interaction network
"kdpE" - Response regulator in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kdpEResponse regulator (237 aa)    
Predicted Functional Partners:
kdpD
K+ sensor histidine kinase (343 aa)
  0.999
trkG
K+ transport system, membrane component (393 aa)
         
  0.887
cpxA
Signal transduction histidine kinase (453 aa)
 
  0.871
phoR
Phosphate regulon sensor histidine kinase (431 aa)
  0.834
fadJ
Multifunctional fatty acid oxidation complex subunit alpha; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities (708 aa)
         
  0.763
fadB
Fatty acid oxidation complex alpha subunit; Involved in the aerobic and anaerobic degradation of long-chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate (718 aa)
         
  0.763
IL1647
Signal transduction histidine kinase (469 aa)
     
  0.761
IL2152
Hypothetical protein (1115 aa)
   
  0.760
IL2005
Na+/proline symporter (1157 aa)
   
  0.760
IL2583
Signal transduction histidine kinase (474 aa)
  0.752
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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