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IL1689 protein (Idiomarina loihiensis) - STRING interaction network
"IL1689" - DNA polymerase III alpha subunit in Idiomarina loihiensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1689DNA polymerase III alpha subunit (1158 aa)    
Predicted Functional Partners:
dnaX
DNA polymerase III, gamma/tau subunits (681 aa)
   
  0.999
dnaN
DNA polymerase sliding clamp subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (367 aa)
   
  0.998
holB
DNA polymerase III subunit delta’ (286 aa)
 
  0.996
holC
DNA polymerase III chi subunit (149 aa)
     
  0.994
holA
DNA polymerase III subunit delta (360 aa)
     
  0.991
polA
DNA polymerase I (921 aa)
   
  0.990
dnaQ
DNA polymerase III subunit epsilon (235 aa)
   
  0.981
IL1420
DNA polymerase III subunit epsilon (248 aa)
     
  0.973
IL1176
3’-5’ exonuclease (215 aa)
     
  0.973
ssb
Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism (186 aa)
   
 
  0.952
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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