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fumB protein (Idiomarina loihiensis) - STRING interaction network
"fumB" - Fumarase B in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fumBFumarase B (507 aa)    
Predicted Functional Partners:
sdhA
Succinate dehydrogenase flavoprotein subunit (588 aa)
   
 
  0.996
sdhB
Succinate dehydrogenase iron-sulfur subunit (237 aa)
   
 
  0.995
sdhC
Succinate dehydrogenase/fumarate reductase cytochrome b subunit (124 aa)
   
 
  0.995
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate (310 aa)
   
 
  0.993
IL2463
NADP-dependent malic enzyme (414 aa)
 
 
  0.993
maeA
Malic enzyme (562 aa)
   
 
  0.990
fumC
Fumarase (460 aa)
   
 
  0.989
sdhD
Succinate dehydrogenase, hydrophobic anchor subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) (115 aa)
   
 
  0.984
IL1210
malate/L-lactate dehydrogenase (356 aa)
       
    0.974
gltB
Glutamate synthase subunit alpha (1488 aa)
     
   
  0.968
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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