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rsbU protein (Idiomarina loihiensis) - STRING interaction network
"rsbU" - Response regulator of sigma subunit, serine phosphatase in Idiomarina loihiensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rsbUResponse regulator of sigma subunit, serine phosphatase (CheY-RsbU) (556 aa)    
Predicted Functional Partners:
rsbV
Anti-anti-sigma regulatory factor (101 aa)
 
 
  0.992
IL1715
Chemotaxis protein CheY (264 aa)
 
       
0.726
IL1545
Thioredoxin-like domain-containing protein (180 aa)
   
          0.696
barA
Hybrid sensor histidine kinase (866 aa)
   
  0.643
cpxA
Signal transduction histidine kinase (453 aa)
   
          0.582
rpoD
DNA-directed RNA polymerase sigma 70 subunit; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (609 aa)
     
   
  0.545
IL1203
Signal transduction histidine kinase (335 aa)
          0.540
clpP
ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (206 aa)
     
   
  0.530
IL0604
Signal transduction histidine kinase (455 aa)
   
  0.527
IL1278
Hypothetical protein (75 aa)
   
          0.525
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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