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IL1718 protein (Idiomarina loihiensis) - STRING interaction network
"IL1718" - Cytochrome c556 in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1718Cytochrome c556 (154 aa)    
Predicted Functional Partners:
IL1719
Cytochrome b (215 aa)
 
          0.859
IL1251
Cytochrome b561 family protein (176 aa)
 
          0.783
IL1717
Amidohydrolase (1026 aa)
 
          0.667
IL1716
Amidohydrolase (433 aa)
              0.614
IL1521
Hypothetical protein (365 aa)
   
          0.543
IL0859
SmpA /OmlA family lipoprotein (128 aa)
   
          0.525
IL1269
Zn-ribbon protein (109 aa)
   
          0.488
IL2145
Hypothetical protein (294 aa)
   
          0.477
IL2113
Porin (323 aa)
   
          0.451
IL1664
Hypothetical protein (249 aa)
   
        0.445
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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