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csrA protein (Idiomarina loihiensis) - STRING interaction network
"csrA" - Carbon storage regulatory protein in Idiomarina loihiensis
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
csrACarbon storage regulatory protein; Could accelerate the degradation of some genes transcripts potentially through selective RNA binding (62 aa)    
Predicted Functional Partners:
hfq
Host factor I-like protein; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs (85 aa)
     
 
  0.883
rpoS
DNA-directed RNA polymerase sigma 38 subunit (322 aa)
       
 
  0.845
barA
Hybrid sensor histidine kinase (866 aa)
           
  0.834
fliA
Flagellar biosynthesis sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes (241 aa)
 
     
  0.794
uvrY
Response regulator (216 aa)
           
  0.784
fliC
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella (471 aa)
 
     
  0.770
ksgA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (288 aa)
         
  0.713
alaS
Alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (865 aa)
         
  0.708
himA
Nucleoid DNA-binding protein, IHF alpha subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control (98 aa)
   
   
  0.694
sun
tRNA and rRNA cytosine-C5-methylase (442 aa)
           
  0.685
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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