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IL1743 protein (Idiomarina loihiensis) - STRING interaction network
"IL1743" - RNA pseudouridylate synthase-family protein in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1743RNA pseudouridylate synthase-family protein (286 aa)    
Predicted Functional Partners:
IL1744
Transcriptional regulator; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves (190 aa)
   
   
  0.934
IL1745
Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves (271 aa)
   
   
  0.911
IL1348
Pseudouridylate synthase; Responsible for synthesis of pseudouridine from uracil (315 aa)
 
  0.906
sfhB
Pseudouridylate synthase; Responsible for synthesis of pseudouridine from uracil (322 aa)
 
  0.881
IL1742
Peptidylarginine deiminase-like protein (349 aa)
   
        0.865
IL1746
Sua5 family translation factor (207 aa)
              0.837
IL1747
Metal-dependent phosphoesterase (275 aa)
     
      0.835
der
GTPase EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis (479 aa)
 
   
  0.805
IL2224
Pseudouridylate synthase (218 aa)
 
  0.779
IL0849
Pseudouridylate synthase (236 aa)
 
  0.758
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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