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IL1772 protein (Idiomarina loihiensis) - STRING interaction network
"IL1772" - LysR family transcriptional regulator in Idiomarina loihiensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1772LysR family transcriptional regulator (303 aa)    
Predicted Functional Partners:
adhC
Alcohol dehydrogenase (372 aa)
              0.749
IL1774
Esterase; Serine hydrolase involved in the detoxification of formaldehyde (278 aa)
              0.740
IL0465
LysR family transcriptional regulator (292 aa)
   
          0.685
IL1609
LysR family transcriptional regulator (305 aa)
   
          0.643
IL0627
LysR family transcriptional regulator (290 aa)
   
          0.628
IL2095
LysR family transcriptional regulator (280 aa)
   
          0.488
oxyR
LysR family transcriptional regulator (304 aa)
   
     
  0.431
IL1774.1
Il-IS_1, transposase (343 aa)
              0.425
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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