STRINGSTRING
IL1793 protein (Idiomarina loihiensis) - STRING interaction network
"IL1793" - Type II phosphatidic acid phosphatase in Idiomarina loihiensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IL1793Type II phosphatidic acid phosphatase (169 aa)    
Predicted Functional Partners:
IL1792
Glycosyl transferase (343 aa)
 
          0.971
mraY
UDP-N-acetylmuramyl pentapeptide phosphotransferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan (360 aa)
         
    0.900
uppP
UDP pyrophosphate phosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin (265 aa)
         
    0.800
rnfE
Electron transport complex protein RsxE; Part of a membrane complex involved in electron transport (226 aa)
              0.562
rnfG
NADH-ubiquinone oxidoreductase subunit RnfG; Part of a membrane complex involved in electron transport (213 aa)
              0.562
rnfD
NADH-ubiquinone oxidoreductase subunit RnfD; Part of a membrane complex involved in electron transport (350 aa)
              0.562
rnfC
Electron transport complex protein RnfC; Part of a membrane complex involved in electron transport (556 aa)
              0.562
rnfB
Electron transport complex protein RnfB; Part of a membrane complex involved in electron transport (193 aa)
              0.562
rnfA
Na(+)-translocating NADH-quinone reductase subunit E; Part of a membrane complex involved in electron transport (193 aa)
              0.562
nth
Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination, leaving a 3’-terminal unsaturated sugar and a product with a terminal 5’-phosphate (211 aa)
              0.511
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
Server load: low (12%) [HD]