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motY protein (Idiomarina loihiensis) - STRING interaction network
"motY" - Sodium-type flagellar protein motY precursor in Idiomarina loihiensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
motYSodium-type flagellar protein motY precursor (298 aa)    
Predicted Functional Partners:
tolB
Translocation protein TolB; Involved in the TonB-independent uptake of proteins (449 aa)
   
 
  0.821
motB
Flagellar motor protein (312 aa)
   
 
 
  0.777
IL1154
Hypothetical protein (387 aa)
   
          0.765
IL1711
Hypothetical protein (252 aa)
   
          0.760
rnt
Ribonuclease T; Trims short 3’ overhangs of a variety of RNA species, leaving a one or two nucleotide 3’ overhang. Responsible for the end-turnover of tRNA- specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis (215 aa)
              0.750
IL1692
Hypothetical protein (406 aa)
   
          0.750
IL1111
Chemotaxis protein CheW (285 aa)
   
        0.749
IL1519
Hypothetical protein (209 aa)
   
          0.746
IL1169
Hypothetical protein (199 aa)
   
          0.744
IL1153
Hypothetical protein (159 aa)
   
          0.736
Your Current Organism:
Idiomarina loihiensis
NCBI taxonomy Id: 283942
Other names: I. loihiensis, I. loihiensis L2TR, Idiomarina loihiensis, Idiomarina loihiensis Donachie et al. 2003, Idiomarina loihiensis L2TR, Idiomarina loihiensis str. L2TR, Idiomarina loihiensis strain L2TR
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